Photobacterium swingsii strain DSM 24669 CFSAN065517_45

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium swingsii strain DSM 24669 CFSAN065517_45 is a Gram-negative bacterium characterized by its ovoid shape and the presence of flagella, which facilitates motility. This organism exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in various environments by adapting to the availability of oxygen. The strain is notable for its single replicon, which is indicative of a streamlined genetic architecture that may contribute to its adaptability and evolutionary fitness. In terms of genomic data, Photobacterium swingsii is cataloged under the accession number PYLZ00000000.1, which provides a reference for researchers interested in further genetic and functional studies. Understanding the traits of Photobacterium swingsii can offer insights into its ecological roles, particularly in marine environments where such bacteria are often found. Their ability to switch between aerobic and anaerobic respiration may enable them to inhabit diverse niches, contributing to nutrient cycling and organic matter decomposition. This adaptability likely plays a critical role in the microbial dynamics of their ecosystems, allowing them to exploit various ecological resources effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium swingsii
Strainstrain DSM 24669 CFSAN065517_45

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium swingsii strain DSM 24669 CFSAN065517_45
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium swingsii strain DSM 24669 CFSAN065517_45, whole

Gene Summary

Adenine Count

1560828 bp

Thymine Count

1562400 bp

Guanine Count

1207750 bp

Cytosine Count

1217419 bp

Genome Length

5548397 bp

Protein-coding Genes

4739 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
twin-arginine translocase subunit tatbC9I94_22280Not AvailablePositive5038153 - 503849412675.2
twin-arginine translocase subunit tatcC9I94_22285Not AvailablePositive5038506 - 503924927563.3
3'-5' ssdna/rna exonuclease tatdC9I94_22290Not AvailablePositive5039315 - 504010329384.1
porphobilinogen synthaseC9I94_22295Not AvailablePositive5040164 - 504121938796.6
transcriptional regulator asncC9I94_22300Not AvailableNegative5041297 - 504175817178.9
ggdef domain-containing proteinC9I94_22305Not AvailablePositive5041921 - 5045064118578.0
16s rrna methyltransferaseC9I94_22310Not AvailablePositive5045108 - 504587827745.7
hypothetical proteinC9I94_22315Not AvailablePositive5046055 - 504643813898.2
tetratricopeptide repeat proteinC9I94_22320Not AvailableNegative5046789 - 504797643767.4
uroporphyrinogen-iii c-methyltransferaseC9I94_22325Not AvailableNegative5047973 - 504919344374.4

Displaying genes 4421 – 4430 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.