Photobacterium swingsii strain DSM 24669 CFSAN065517_45

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium swingsii strain DSM 24669 CFSAN065517_45 is a Gram-negative bacterium characterized by its ovoid shape and the presence of flagella, which facilitates motility. This organism exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in various environments by adapting to the availability of oxygen. The strain is notable for its single replicon, which is indicative of a streamlined genetic architecture that may contribute to its adaptability and evolutionary fitness. In terms of genomic data, Photobacterium swingsii is cataloged under the accession number PYLZ00000000.1, which provides a reference for researchers interested in further genetic and functional studies. Understanding the traits of Photobacterium swingsii can offer insights into its ecological roles, particularly in marine environments where such bacteria are often found. Their ability to switch between aerobic and anaerobic respiration may enable them to inhabit diverse niches, contributing to nutrient cycling and organic matter decomposition. This adaptability likely plays a critical role in the microbial dynamics of their ecosystems, allowing them to exploit various ecological resources effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium swingsii
Strainstrain DSM 24669 CFSAN065517_45

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium swingsii strain DSM 24669 CFSAN065517_45
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium swingsii strain DSM 24669 CFSAN065517_45, whole

Gene Summary

Adenine Count

1560828 bp

Thymine Count

1562400 bp

Guanine Count

1207750 bp

Cytosine Count

1217419 bp

Genome Length

5548397 bp

Protein-coding Genes

4739 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
trna (cmo5u34)-methyltransferaseC9I94_01800Not AvailableNegative380522 - 38125027208.4
duf72 domain-containing proteinC9I94_01805Not AvailableNegative381468 - 38235833709.3
aspartate--trna ligaseC9I94_01810Not AvailablePositive382693 - 38448966984.3
yebc/pmpr family dna-binding transcriptional regulatorC9I94_01815Not AvailablePositive384611 - 38535426135.4
crossover junction endodeoxyribonuclease ruvcC9I94_01820Not AvailablePositive385377 - 38589818153.0
glycosyltransferase family 4 proteinC9I94_01825Not AvailablePositive386025 - 38709839960.5
holliday junction branch migration protein ruvaC9I94_01830Not AvailablePositive387209 - 38782922343.0
holliday junction branch migration dna helicase ruvbC9I94_01835Not AvailablePositive387849 - 38886237604.3
cytochrome d terminal oxidase subunit 1C9I94_01840Not AvailablePositive389937 - 39152358957.9
cytochrome d ubiquinol oxidase subunit iiC9I94_01845Not AvailablePositive391539 - 39267541507.1

Displaying genes 391 – 400 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.