Photobacterium swingsii strain DSM 24669 CFSAN065517_45

ovoidfacultative aerobe/anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium swingsii strain DSM 24669 CFSAN065517_45 is a Gram-negative bacterium characterized by its ovoid shape and the presence of flagella, which facilitates motility. This organism exhibits a facultative aerobe/anaerobe oxygen requirement, allowing it to thrive in various environments by adapting to the availability of oxygen. The strain is notable for its single replicon, which is indicative of a streamlined genetic architecture that may contribute to its adaptability and evolutionary fitness. In terms of genomic data, Photobacterium swingsii is cataloged under the accession number PYLZ00000000.1, which provides a reference for researchers interested in further genetic and functional studies. Understanding the traits of Photobacterium swingsii can offer insights into its ecological roles, particularly in marine environments where such bacteria are often found. Their ability to switch between aerobic and anaerobic respiration may enable them to inhabit diverse niches, contributing to nutrient cycling and organic matter decomposition. This adaptability likely plays a critical role in the microbial dynamics of their ecosystems, allowing them to exploit various ecological resources effectively.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium swingsii
Strainstrain DSM 24669 CFSAN065517_45

Profile

Physiology
Gram staining propertiesGram-negative
Shapeovoid
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Photobacterium swingsii strain DSM 24669 CFSAN065517_45
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsfacultative aerobe/anaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium swingsii strain DSM 24669 CFSAN065517_45, whole

Gene Summary

Adenine Count

1560828 bp

Thymine Count

1562400 bp

Guanine Count

1207750 bp

Cytosine Count

1217419 bp

Genome Length

5548397 bp

Protein-coding Genes

4739 genes

Non-Coding Genes

142 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
protein translocase subunit secdC9I94_12370Not AvailableNegative2858096 - 285994967163.6
preprotein translocase subunit yajcC9I94_12375Not AvailableNegative2859975 - 286031012074.9
pp_02427C9I94_12380Not AvailableNegative2860333 - 2861460Not Available
trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase queaC9I94_12385Not AvailableNegative2861794 - 286285239153.4
trypsinC9I94_12390Not AvailableNegative2862934 - 286399836782.6
cbs domain-containing proteinC9I94_12395Not AvailablePositive2864235 - 286468116459.0
duf479 domain-containing proteinC9I94_12400Not AvailablePositive2864789 - 286538523262.6
isocitrate lyaseC9I94_12405Not AvailableNegative2865568 - 286687247832.1
malate synthase aC9I94_12410Not AvailableNegative2866980 - 286859360335.5
hydrogen peroxide-inducible genes activatorC9I94_12415Not AvailableNegative2869243 - 287013933158.4

Displaying genes 2461 – 2470 of 4881 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.