Photobacterium aquimaris strain DSM 23343 CFSAN065518_113

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain DSM 23343, also designated as CFSAN065518_113, is an aerobic bacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain features a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. As an aerobic organism, Photobacterium aquimaris relies on oxygen for its metabolic processes, which aligns with its habitat in aquatic environments. The presence of flagella allows for active movement, likely aiding in the search for nutrients or optimal living conditions within its ecological niche. The strain is cataloged under the accession number PYLY00000000.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic framework of Photobacterium aquimaris could yield insights into its metabolic capabilities and ecological interactions. Biologically, the motility conferred by flagella and the aerobic nature of this strain suggest that it may play a significant role in nutrient cycling within marine ecosystems. Its ability to thrive in oxygen-rich environments may also indicate potential interactions with other microbial communities, highlighting its ecological importance in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain DSM 23343 CFSAN065518_113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain DSM 23343 CFSAN065518_113, whole

Gene Summary

Adenine Count

1355865 bp

Thymine Count

1353102 bp

Guanine Count

879156 bp

Cytosine Count

877233 bp

Genome Length

4465356 bp

Protein-coding Genes

3861 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinC0W81_19350Not AvailablePositive4274769 - 427527818632.5
ggdef domain-containing proteinC0W81_19355Not AvailableNegative4275593 - 427681347079.6
elongation factor tuC0W81_19360Not AvailablePositive4276814 - 42770558518.34
30s ribosomal protein s10C0W81_19365Not AvailablePositive4277498 - 427780911739.3
50s ribosomal protein l3C0W81_19370Not AvailablePositive4277824 - 427845322458.1
50s ribosomal protein l4C0W81_19375Not AvailablePositive4278470 - 427907221721.4
50s ribosomal protein l23C0W81_19380Not AvailablePositive4279069 - 427937111131.7
50s ribosomal protein l2C0W81_19385Not AvailablePositive4279390 - 428021429927.3
30s ribosomal protein s19C0W81_19390Not AvailablePositive4280233 - 428051110455.0
50s ribosomal protein l22C0W81_19395Not AvailablePositive4280522 - 428085412179.9

Displaying genes 3811 – 3820 of 4017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.