Photobacterium aquimaris strain DSM 23343 CFSAN065518_113

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain DSM 23343, also designated as CFSAN065518_113, is an aerobic bacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain features a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. As an aerobic organism, Photobacterium aquimaris relies on oxygen for its metabolic processes, which aligns with its habitat in aquatic environments. The presence of flagella allows for active movement, likely aiding in the search for nutrients or optimal living conditions within its ecological niche. The strain is cataloged under the accession number PYLY00000000.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic framework of Photobacterium aquimaris could yield insights into its metabolic capabilities and ecological interactions. Biologically, the motility conferred by flagella and the aerobic nature of this strain suggest that it may play a significant role in nutrient cycling within marine ecosystems. Its ability to thrive in oxygen-rich environments may also indicate potential interactions with other microbial communities, highlighting its ecological importance in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain DSM 23343 CFSAN065518_113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain DSM 23343 CFSAN065518_113, whole

Gene Summary

Adenine Count

1355865 bp

Thymine Count

1353102 bp

Guanine Count

879156 bp

Cytosine Count

877233 bp

Genome Length

4465356 bp

Protein-coding Genes

3861 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
5-formyltetrahydrofolate cyclo-ligaseC0W81_14220Not AvailablePositive3144413 - 314501823240.0
ribose-5-phosphate isomerase rpiaC0W81_14225Not AvailablePositive3145202 - 314586123323.1
phosphoglycerate dehydrogenaseC0W81_14230Not AvailablePositive3146097 - 314732644277.5
oxidative stress defense proteinC0W81_14235Not AvailableNegative3147423 - 314814226143.1
mechanosensitive ion channel proteinC0W81_14240Not AvailableNegative3148402 - 314928631750.8
class ii fructose-bisphosphate aldolaseC0W81_14245Not AvailableNegative3149632 - 315070838563.4
phosphoglycerate kinaseC0W81_14250Not AvailableNegative3150868 - 315203140533.8
erythrose-4-phosphate dehydrogenaseC0W81_14255Not AvailableNegative3152117 - 315316938423.8
duf2333 domain-containing proteinC0W81_14260Not AvailablePositive3153577 - 315456336654.7
cold-shock proteinC0W81_14265Not AvailablePositive3154763 - 31549757536.06

Displaying genes 2831 – 2840 of 4017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.