Photobacterium aquimaris strain DSM 23343 CFSAN065518_113

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain DSM 23343, also designated as CFSAN065518_113, is an aerobic bacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain features a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. As an aerobic organism, Photobacterium aquimaris relies on oxygen for its metabolic processes, which aligns with its habitat in aquatic environments. The presence of flagella allows for active movement, likely aiding in the search for nutrients or optimal living conditions within its ecological niche. The strain is cataloged under the accession number PYLY00000000.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic framework of Photobacterium aquimaris could yield insights into its metabolic capabilities and ecological interactions. Biologically, the motility conferred by flagella and the aerobic nature of this strain suggest that it may play a significant role in nutrient cycling within marine ecosystems. Its ability to thrive in oxygen-rich environments may also indicate potential interactions with other microbial communities, highlighting its ecological importance in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain DSM 23343 CFSAN065518_113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain DSM 23343 CFSAN065518_113, whole

Gene Summary

Adenine Count

1355865 bp

Thymine Count

1353102 bp

Guanine Count

879156 bp

Cytosine Count

877233 bp

Genome Length

4465356 bp

Protein-coding Genes

3861 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
flagellar assembly protein flihC0W81_00920Not AvailablePositive249892 - 25070129981.9
flagellar protein export atpase fliiC0W81_00925Not AvailablePositive250698 - 25201446718.9
flagella biosynthesis chaperone flijC0W81_00930Not AvailablePositive252058 - 25250117833.3
flagellar hook-length control protein flikC0W81_00935Not AvailablePositive252634 - 25401348665.3
flagellar basal body-associated protein flilC0W81_00940Not AvailablePositive254066 - 25454517656.9
flagellar motor switch protein flimC0W81_00945Not AvailablePositive254553 - 25560239736.8
flagellar motor switch protein flinC0W81_00950Not AvailablePositive255625 - 25601114218.9
flagellar biosynthetic protein flioC0W81_00955Not AvailablePositive256021 - 25637713078.3
flagellar biosynthetic protein flipC0W81_00960Not AvailablePositive256409 - 25720628548.9
flagellar biosynthetic protein fliqC0W81_00965Not AvailablePositive257237 - 25750610163.1

Displaying genes 221 – 230 of 4017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.