Photobacterium aquimaris strain DSM 23343 CFSAN065518_113

aerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium aquimaris strain DSM 23343, also designated as CFSAN065518_113, is an aerobic bacterium characterized by the presence of flagella, which suggests a motile lifestyle. This strain features a single replicon, indicating a streamlined genetic structure that may contribute to its adaptability in various environments. As an aerobic organism, Photobacterium aquimaris relies on oxygen for its metabolic processes, which aligns with its habitat in aquatic environments. The presence of flagella allows for active movement, likely aiding in the search for nutrients or optimal living conditions within its ecological niche. The strain is cataloged under the accession number PYLY00000000.1, which provides a reference for genetic and genomic studies related to this organism. Understanding the genetic framework of Photobacterium aquimaris could yield insights into its metabolic capabilities and ecological interactions. Biologically, the motility conferred by flagella and the aerobic nature of this strain suggest that it may play a significant role in nutrient cycling within marine ecosystems. Its ability to thrive in oxygen-rich environments may also indicate potential interactions with other microbial communities, highlighting its ecological importance in aquatic habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium aquimaris
Strainstrain DSM 23343 CFSAN065518_113

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium aquimaris strain DSM 23343 CFSAN065518_113, whole

Gene Summary

Adenine Count

1355865 bp

Thymine Count

1353102 bp

Guanine Count

879156 bp

Cytosine Count

877233 bp

Genome Length

4465356 bp

Protein-coding Genes

3861 genes

Non-Coding Genes

156 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sulfite exporter taue/safe family proteinC0W81_05965Not AvailablePositive1307026 - 130792232219.8
udp-2,3-diacylglucosamine diphosphataseC0W81_05970Not AvailableNegative1308010 - 130875028402.9
peptidylprolyl isomeraseC0W81_05975Not AvailableNegative1308795 - 130928918083.4
cysteine--trna ligaseC0W81_05980Not AvailablePositive1309481 - 131086351834.2
ion transporterC0W81_05985Not AvailableNegative1310929 - 131174730643.3
marc family proteinC0W81_05990Not AvailableNegative1311934 - 131257222622.6
bifunctional acetaldehyde-coa/alcohol dehydrogenaseC0W81_05995Not AvailablePositive1313297 - 131598196664.0
hypothetical proteinC0W81_06000Not AvailableNegative1316190 - 131687925260.0
hypothetical proteinC0W81_06005Not AvailableNegative1317101 - 131761018839.5
alpha-l-glutamate ligase-like proteinC0W81_06010Not AvailableNegative1317746 - 131872035522.1

Displaying genes 1211 – 1220 of 4017 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.