Rhizobium sp. JAB6 C04_11

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. JAB6 C04_11 is a rod-shaped bacterium characterized by the presence of flagella, which facilitates its motility in various environments. This species is notable for having a single replicon, indicating a streamlined genomic structure that may contribute to its adaptability and efficiency in specific ecological niches. The accession number for Rhizobium sp. JAB6 C04_11 is PYJQ00000000.1, which provides a reference for researchers looking to access genomic data related to this strain. The ability of Rhizobium species, including JAB6 C04_11, to form symbiotic relationships with leguminous plants is a critical trait that underscores their ecological significance. Through nitrogen fixation, these bacteria convert atmospheric nitrogen into a bioavailable form, thus enhancing soil fertility and supporting plant growth. The ecological role of Rhizobium sp. JAB6 C04_11 extends beyond its symbiotic relationships; it contributes to the overall nitrogen cycle within ecosystems where it is present. By fostering plant health and contributing to nutrient cycling, this bacterium plays an essential role in promoting biodiversity and sustaining agricultural productivity. The understanding of its traits can aid in harnessing its capabilities for agricultural and ecological applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. JAB6
StrainC04_11

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. JAB6 C04_11
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. JAB6 C04_11, whole genome shotgun sequence.

Gene Summary

Adenine Count

800562 bp

Thymine Count

798900 bp

Guanine Count

1198498 bp

Cytosine Count

1216304 bp

Genome Length

4014264 bp

Protein-coding Genes

3733 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorC7U61_03170Not AvailablePositive646052 - 64692432547.9
spermidine/putrescine abc transporter substrate-binding protein potfC7U61_03175Not AvailablePositive647109 - 64820640447.0
polyamine abc transporter atp-binding proteinC7U61_03180Not AvailablePositive648337 - 64947941702.2
putrescine/spermidine abc transporter permeaseC7U61_03185Not AvailablePositive649482 - 65039333942.4
putrescine abc transporter permease potiC7U61_03190Not AvailablePositive650397 - 65121229582.0
asma family proteinC7U61_03195Not AvailableNegative651228 - 65312968202.2
acetoacetate--coa ligaseC7U61_03200Not AvailablePositive653294 - 65524671372.5
atp-dependent rna helicaseC7U61_03205Not AvailablePositive655601 - 65751169517.9
sam-dependent methyltransferaseC7U61_03210Not AvailableNegative657596 - 65861836389.7
sulfurtransferaseC7U61_03215Not AvailablePositive658992 - 65980430401.7

Displaying genes 651 – 660 of 3802 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.