Rhizobium sp. SEMIA4064 C01_22

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. SEMIA4064 C01_22 is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This motility is significant for its ecological interactions, particularly in its symbiotic relationships with legumes. Rhizobium species are well-known for their ability to fix atmospheric nitrogen in root nodules of host plants, contributing to soil fertility and supporting plant growth. The genome of Rhizobium sp. SEMIA4064 C01_22 contains a single replicon, indicating a streamlined genetic structure that may enhance its adaptability and efficiency in symbiotic nitrogen fixation. The accession number for this strain is PYJN00000000.1, which allows for its identification and differentiation from other strains in genomic databases. The combination of its rod shape, flagellar motility, and genetic characteristics suggests that Rhizobium sp. SEMIA4064 C01_22 is well-adapted for its ecological niche, facilitating effective colonization of host plants and promoting beneficial interactions in agricultural systems. These traits underscore the importance of Rhizobium sp. SEMIA4064 C01_22 in sustainable agriculture, where its nitrogen-fixing capabilities can reduce the need for synthetic fertilizers and enhance soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. SEMIA4064
StrainC01_22

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. SEMIA4064 C01_22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. SEMIA4064 C01_22, whole genome shotgun sequence.

Gene Summary

Adenine Count

814685 bp

Thymine Count

808517 bp

Guanine Count

1200845 bp

Cytosine Count

1227932 bp

Genome Length

4051979 bp

Protein-coding Genes

3767 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
n-formylglutamate amidohydrolaseC9E91_12135Not AvailableNegative2490436 - 249120327868.2
rpir family transcriptional regulatorC9E91_12140Not AvailablePositive2491382 - 249225432383.5
iron abc transporter substrate-binding proteinC9E91_12145Not AvailablePositive2492443 - 249354638832.9
acriflavin resistance proteinC9E91_12150Not AvailablePositive2493619 - 249451232500.8
spermidine/putrescine abc transporter permeaseC9E91_12155Not AvailablePositive2494509 - 249529729167.7
spermidine/putrescine abc transporter atp-binding proteinC9E91_12160Not AvailablePositive2495309 - 249637038395.5
6,7-dimethyl-8-ribityllumazine synthaseC9E91_12165Not AvailablePositive2496710 - 249718617529.1
glyoxalaseC9E91_12170Not AvailablePositive2497246 - 249759612975.5
phosphonate metabolism transcriptional regulator phnfC9E91_12175Not AvailableNegative2497602 - 249833026547.7
sam-dependent methyltransferaseC9E91_12180Not AvailableNegative2498332 - 249901825760.6

Displaying genes 2431 – 2440 of 3871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.