Rhizobium sp. SEMIA4064 C01_22

Rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Rhizobiaceae

Genus

Rhizobium

Description

Rhizobium sp. SEMIA4064 C01_22 is a rod-shaped bacterium characterized by the presence of flagella, which enables motility. This motility is significant for its ecological interactions, particularly in its symbiotic relationships with legumes. Rhizobium species are well-known for their ability to fix atmospheric nitrogen in root nodules of host plants, contributing to soil fertility and supporting plant growth. The genome of Rhizobium sp. SEMIA4064 C01_22 contains a single replicon, indicating a streamlined genetic structure that may enhance its adaptability and efficiency in symbiotic nitrogen fixation. The accession number for this strain is PYJN00000000.1, which allows for its identification and differentiation from other strains in genomic databases. The combination of its rod shape, flagellar motility, and genetic characteristics suggests that Rhizobium sp. SEMIA4064 C01_22 is well-adapted for its ecological niche, facilitating effective colonization of host plants and promoting beneficial interactions in agricultural systems. These traits underscore the importance of Rhizobium sp. SEMIA4064 C01_22 in sustainable agriculture, where its nitrogen-fixing capabilities can reduce the need for synthetic fertilizers and enhance soil health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyRhizobiaceae
GenusRhizobium
SpeciesRhizobium sp. SEMIA4064
StrainC01_22

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Rhizobium sp. SEMIA4064 C01_22
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhizobium sp. SEMIA4064 C01_22, whole genome shotgun sequence.

Gene Summary

Adenine Count

814685 bp

Thymine Count

808517 bp

Guanine Count

1200845 bp

Cytosine Count

1227932 bp

Genome Length

4051979 bp

Protein-coding Genes

3767 genes

Non-Coding Genes

104 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3,4-dihydroxy-2-butanone-4-phosphate synthaseC9E91_04835Not AvailableNegative987584 - 98868740457.4
chorismate synthaseC9E91_04840Not AvailableNegative988698 - 98979539435.9
hypothetical proteinC9E91_04845Not AvailablePositive989794 - 99007210643.8
hypothetical proteinC9E91_04850Not AvailablePositive990094 - 9903549314.06
hypothetical proteinC9E91_04855Not AvailablePositive990534 - 99105819557.7
histidine phosphatase family proteinC9E91_04860Not AvailableNegative991074 - 99167022557.7
enoyl-[acyl-carrier-protein] reductase fabiC9E91_04865Not AvailableNegative991689 - 99250729025.8
molecular chaperone dnajC9E91_04870Not AvailableNegative992630 - 99379341997.6
ornithine cyclodeaminaseC9E91_04875Not AvailablePositive994149 - 99515337036.5
histidine ammonia-lyaseC9E91_04880Not AvailablePositive995184 - 99670452400.6

Displaying genes 1001 – 1010 of 3871 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.