Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii family | CLV79_10154 | Not Available | Negative | 53148 - 53525 | 13749.8 |
| 1a family penicillin-binding protein | CLV79_10155 | Not Available | Positive | 53732 - 56053 | 81767.9 |
| hypothetical protein | CLV79_10156 | Not Available | Negative | 56055 - 56747 | 23810.5 |
| atp-binding cassette subfamily c protein | CLV79_10157 | Not Available | Positive | 56893 - 58632 | 61987.8 |
| hlyd family type i secretion membrane fusion protein | CLV79_10158 | Not Available | Positive | 58629 - 59951 | 48870.5 |
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV79_10159 | Not Available | Positive | 60017 - 60487 | 15900.2 |
| glycerophosphoryl diester phosphodiesterase | CLV79_10160 | Not Available | Positive | 60484 - 61260 | 27649.0 |
| hypothetical protein | CLV79_10161 | Not Available | Positive | 61292 - 62494 | 44370.1 |
| 4a-hydroxytetrahydrobiopterin dehydratase | CLV79_10162 | Not Available | Positive | 62491 - 62778 | 10642.6 |
| thiol peroxidase (atypical 2-cys peroxiredoxin) | CLV79_10163 | Not Available | Negative | 62909 - 63397 | 17196.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
