Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase gamma subunit | CLV79_102116 | Not Available | Negative | 660739 - 661218 | 16844.3 |
| lysr family transcriptional regulator | CLV79_102117 | Not Available | Negative | 661312 - 662196 | 32143.2 |
| oligopeptide transport system substrate-binding protein | CLV79_102118 | Not Available | Positive | 662721 - 664361 | 60999.8 |
| oligopeptide transport system permease protein | CLV79_102119 | Not Available | Positive | 664453 - 665376 | 33894.1 |
| oligopeptide transport system permease protein | CLV79_102120 | Not Available | Positive | 665388 - 666320 | 33667.7 |
| oligopeptide transport system atp-binding protein | CLV79_102121 | Not Available | Positive | 666320 - 667294 | 35726.4 |
| oligopeptide transport system atp-binding protein | CLV79_102122 | Not Available | Positive | 667294 - 668514 | 43806.1 |
| response regulator receiver domain-containing protein | CLV79_102123 | Not Available | Negative | 668768 - 669133 | 12742.3 |
| pas domain s-box-containing protein | CLV79_102124 | Not Available | Negative | 669126 - 670175 | 38655.8 |
| ssu ribosomal protein s12p methylthiotransferase | CLV79_102125 | Not Available | Negative | 670306 - 671685 | 50549.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
