Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | CLV79_101522 | Not Available | Negative | 506004 - 506648 | 23045.9 |
| protein translocase subunit yidc | CLV79_101523 | Not Available | Negative | 506660 - 508495 | 67253.7 |
| diguanylate cyclase/phosphodiesterase | CLV79_101524 | Not Available | Negative | 508634 - 510181 | 55334.3 |
| trna 2-thiocytidine biosynthesis protein ttca | CLV79_101525 | Not Available | Negative | 510304 - 511167 | 32185.9 |
| hypothetical protein | CLV79_101526 | Not Available | Negative | 511399 - 511620 | 8001.85 |
| ribonuclease p protein component | CLV79_101527 | Not Available | Negative | 511617 - 512021 | 14720.8 |
| lsu ribosomal protein l34p | CLV79_101528 | Not Available | Negative | 512030 - 512164 | 5095.37 |
| putative membrane protein ydjx (tvp38/tmem64 family) | CLV79_101529 | Not Available | Positive | 512389 - 513153 | 26540.1 |
| pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (e3) component | CLV79_101530 | Not Available | Positive | 513150 - 514568 | 49798.1 |
| signal transduction histidine kinase | CLV79_101531 | Not Available | Positive | 514603 - 516000 | 50503.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
