Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxyphenylpyruvate dioxygenase | CLV79_12113 | Not Available | Positive | 3637018 - 3638919 | 68899.8 |
| 4-carboxymuconolactone decarboxylase | CLV79_12114 | Not Available | Positive | 3638916 - 3639293 | 13396.9 |
| protocatechuate 3,4-dioxygenase beta subunit | CLV79_12115 | Not Available | Positive | 3639290 - 3640069 | 28817.2 |
| protocatechuate 3,4-dioxygenase alpha subunit | CLV79_12116 | Not Available | Positive | 3640069 - 3640671 | 21847.8 |
| uncharacterized protein (duf849 family) | CLV79_12117 | Not Available | Positive | 3640682 - 3641524 | 30500.6 |
| 3-oxoadipate enol-lactonase | CLV79_12118 | Not Available | Positive | 3641521 - 3642309 | 27557.2 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CLV79_12119 | Not Available | Positive | 3642306 - 3643373 | 37352.0 |
| iclr family transcriptional regulator | CLV79_12120 | Not Available | Negative | 3643353 - 3644114 | 27183.3 |
| 3-oxoadipate coa-transferase alpha subunit | CLV79_12121 | Not Available | Positive | 3644245 - 3644952 | 24879.9 |
| 3-oxoadipate coa-transferase beta subunit | CLV79_12122 | Not Available | Positive | 3644949 - 3645632 | 23693.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
