Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s ribosomal rna | Not Available | Not Available | Positive | 2424 - 5257 | Not Available |
| atp-dependent clp protease atp-binding subunit clpb | CLV79_1013 | Not Available | Negative | 1989 - 4604 | 95927.8 |
| hypothetical protein | CLV79_1014 | Not Available | Negative | 4777 - 5139 | 13023.8 |
| orotidine-5'-phosphate decarboxylase | CLV79_1015 | Not Available | Positive | 5286 - 6017 | 25451.8 |
| hypothetical protein | CLV79_1016 | Not Available | Positive | 6130 - 6342 | 7765.22 |
| d-amino-acid dehydrogenase | CLV79_1017 | Not Available | Negative | 6413 - 7654 | 44889.4 |
| 2,4-dihydroxyhept-2-enedioate aldolase | CLV79_10110 | Not Available | Positive | 8051 - 8815 | 27247.8 |
| 8-oxo-dgtp diphosphatase | CLV79_10111 | Not Available | Negative | 8812 - 9249 | 15867.8 |
| dna polymerase-4 | CLV79_10112 | Not Available | Positive | 9368 - 10504 | 41551.3 |
| transglycosylase-like protein with slt domain | CLV79_10113 | Not Available | Negative | 10501 - 11388 | 31571.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
