Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | CLV79_108122 | Not Available | Negative | 2508593 - 2509456 | 30818.7 |
| catechol 2,3-dioxygenase | CLV79_108123 | Not Available | Negative | 2509553 - 2510038 | 17375.5 |
| l,d-transpeptidase-like protein | CLV79_108124 | Not Available | Positive | 2510225 - 2510776 | 19749.6 |
| tryptophanyl-trna synthetase | CLV79_108125 | Not Available | Negative | 2511017 - 2512033 | 37235.6 |
| membrane associated rhomboid family serine protease | CLV79_108126 | Not Available | Positive | 2512113 - 2512826 | 24918.1 |
| putative peptidoglycan lipid ii flippase | CLV79_108127 | Not Available | Negative | 2512823 - 2514409 | 56145.1 |
| utp--glnb (protein pii) uridylyltransferase glnd | CLV79_108128 | Not Available | Negative | 2514406 - 2517225 | 105817.0 |
| amino acid/amide abc transporter substrate-binding protein (haat family) | CLV79_108129 | Not Available | Negative | 2517185 - 2518375 | 40342.2 |
| 16s rrna (cytidine1402-2'-o)-methyltransferase | CLV79_108130 | Not Available | Positive | 2518443 - 2519330 | 31275.6 |
| putative endonuclease | CLV79_108131 | Not Available | Positive | 2519532 - 2519915 | 14008.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
