Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 2 | CLV79_101164 | Not Available | Negative | 162807 - 164051 | 45347.4 |
| 3-deoxy-manno-octulosonate cytidylyltransferase (cmp-kdo synthetase) | CLV79_101165 | Not Available | Negative | 164048 - 164851 | 29553.0 |
| 3'(2'),5'-bisphosphate nucleotidase | CLV79_101166 | Not Available | Negative | 164851 - 165645 | 28254.1 |
| abc-type polysaccharide/polyol phosphate export permease | CLV79_101167 | Not Available | Positive | 165726 - 166613 | 32218.2 |
| sh3 domain-containing protein | CLV79_101168 | Not Available | Positive | 166610 - 167212 | 21226.2 |
| alkylated dna repair protein (dna oxidative demethylase) | CLV79_101169 | Not Available | Negative | 167269 - 167877 | 21710.2 |
| molecular chaperone dnak | CLV79_101170 | Not Available | Positive | 168085 - 170007 | 69388.0 |
| molecular chaperone dnaj | CLV79_101171 | Not Available | Positive | 170089 - 171243 | 41080.3 |
| dna repair protein radc | CLV79_101172 | Not Available | Positive | 171289 - 172050 | 27991.0 |
| phosphate abc transporter substrate-binding protein (phot family) | CLV79_101173 | Not Available | Negative | 172047 - 173657 | 56862.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
