Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase d | CLV79_104271 | Not Available | Positive | 1718328 - 1719359 | 36430.6 |
| rna polymerase rpoh-like sigma 32 subunit | CLV79_104272 | Not Available | Positive | 1719525 - 1720424 | 34324.8 |
| putative dehydrogenase | CLV79_104273 | Not Available | Positive | 1720512 - 1721486 | 35640.6 |
| putative nad(p)-binding protein | CLV79_104274 | Not Available | Positive | 1721532 - 1722233 | 25403.7 |
| acetyltransferase (gnat) family protein | CLV79_104275 | Not Available | Negative | 1722230 - 1722727 | 17738.4 |
| oligoendopeptidase f | CLV79_104276 | Not Available | Negative | 1722724 - 1724541 | 68468.0 |
| endonuclease/exonuclease/phosphatase (eep) superfamily protein yafd | CLV79_104277 | Not Available | Negative | 1724620 - 1725699 | 40210.2 |
| dna ligase-1 | CLV79_104278 | Not Available | Negative | 1725696 - 1727300 | 60473.6 |
| putative mrna 3-end processing factor | CLV79_104279 | Not Available | Negative | 1727297 - 1728325 | 37227.7 |
| 5,10-methylenetetrahydrofolate reductase (nad(p)) | CLV79_104280 | Not Available | Negative | 1728469 - 1729335 | 31006.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
