Limimaricola soesokkakensis strain DSM 29956

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Limimaricola

Description

Limimaricola soesokkakensis strain DSM 29956 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which is indicative of its genomic structure. The sequence data for this strain can be accessed under the accession number PYGB00000000.1. As a member of the Limimaricola genus, this bacterium may play a role in specific ecological niches, particularly in aquatic environments where members of this genus are often found. The Gram-negative classification suggests that it possesses an outer membrane, which may influence its interactions with other microorganisms and its resilience to environmental stresses. The rod shape of Limimaricola soesokkakensis could also suggest potential motility characteristics, aiding in its adaptation to various habitats. Understanding the traits of Limimaricola soesokkakensis can contribute to insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities. Its presence in specific environments may indicate its adaptation strategies and functional capabilities, making it a subject of interest for further research in microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLimimaricola
SpeciesLimimaricola soesokkakensis
Strainstrain DSM 29956

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimaricola soesokkakensis strain DSM 29956 Ga0180984_140, whole

Gene Summary

Adenine Count

629284 bp

Thymine Count

630096 bp

Guanine Count

1284212 bp

Cytosine Count

1287394 bp

Genome Length

3830986 bp

Protein-coding Genes

3606 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
xanthine dehydrogenase accessory factorCLV79_103364Not AvailablePositive1396090 - 139697731309.7
hlyd family secretion proteinCLV79_103365Not AvailablePositive1397111 - 139859552078.2
multidrug efflux pump subunit acrbCLV79_103366Not AvailablePositive1398592 - 1401936118330.0
marr family transcriptional regulatorCLV79_103367Not AvailablePositive1402090 - 140254517038.9
rnd family efflux transporter mfp subunitCLV79_103368Not AvailablePositive1402542 - 140358536541.2
multidrug efflux pump subunit acrbCLV79_103369Not AvailablePositive1403601 - 1406657108683.0
3-dehydroquinate dehydrataseCLV79_103370Not AvailableNegative1406701 - 140713815952.1
assimilatory nitrate reductase (nadh) alpha subunit apoproteinCLV79_103371Not AvailableNegative1407246 - 140990093867.3
nitrite reductase (nadh) small subunitCLV79_103372Not AvailableNegative1409897 - 141022911677.9
assimilatory nitrite reductase (nad(p)h) large subunit precursorCLV79_103373Not AvailableNegative1410226 - 141266787950.4

Displaying genes 1401 – 1410 of 3673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.