Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease yncb(thermonuclease family) | CLV79_103265 | Not Available | Negative | 1295347 - 1296027 | 24163.2 |
| choline dehydrogenase | CLV79_103266 | Not Available | Negative | 1296109 - 1297773 | 60638.8 |
| betaine aldehyde dehydrogenase | CLV79_103267 | Not Available | Negative | 1297845 - 1299302 | 51580.3 |
| choline-sulfatase | CLV79_103268 | Not Available | Negative | 1299337 - 1300848 | 56811.6 |
| tetr family transcriptional regulator | CLV79_103269 | Not Available | Negative | 1300845 - 1301420 | 20736.4 |
| glycine betaine/proline transport system substrate-binding protein | CLV79_103270 | Not Available | Positive | 1301534 - 1302472 | 33206.8 |
| glycine betaine/proline transport system permease protein | CLV79_103271 | Not Available | Positive | 1302648 - 1303478 | 29766.5 |
| glycine betaine/proline transport system atp-binding protein | CLV79_103272 | Not Available | Positive | 1303486 - 1304547 | 38451.6 |
| drug/metabolite transporter (dmt)-like permease | CLV79_103273 | Not Available | Negative | 1304498 - 1305457 | 33606.2 |
| l-lysine exporter family protein lyse/argo | CLV79_103274 | Not Available | Negative | 1305562 - 1306179 | 21106.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
