Limimaricola soesokkakensis strain DSM 29956

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Limimaricola

Description

Limimaricola soesokkakensis strain DSM 29956 is a Gram-negative, rod-shaped bacterium. This strain is characterized by having a single replicon, which is indicative of its genomic structure. The sequence data for this strain can be accessed under the accession number PYGB00000000.1. As a member of the Limimaricola genus, this bacterium may play a role in specific ecological niches, particularly in aquatic environments where members of this genus are often found. The Gram-negative classification suggests that it possesses an outer membrane, which may influence its interactions with other microorganisms and its resilience to environmental stresses. The rod shape of Limimaricola soesokkakensis could also suggest potential motility characteristics, aiding in its adaptation to various habitats. Understanding the traits of Limimaricola soesokkakensis can contribute to insights into its ecological role, particularly in nutrient cycling and interactions within microbial communities. Its presence in specific environments may indicate its adaptation strategies and functional capabilities, making it a subject of interest for further research in microbiology and ecology.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusLimimaricola
SpeciesLimimaricola soesokkakensis
Strainstrain DSM 29956

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Limimaricola soesokkakensis strain DSM 29956 Ga0180984_140, whole

Gene Summary

Adenine Count

629284 bp

Thymine Count

630096 bp

Guanine Count

1284212 bp

Cytosine Count

1287394 bp

Genome Length

3830986 bp

Protein-coding Genes

3606 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinCLV79_103215Not AvailableNegative1244922 - 124529913578.8
phosphoribosylamine--glycine ligaseCLV79_103216Not AvailablePositive1245465 - 124673944769.4
card family transcriptional regulatorCLV79_103217Not AvailableNegative1246904 - 124741618922.6
ferredoxinCLV79_103218Not AvailableNegative1247608 - 124794312467.8
heat shock protein hsp15CLV79_103219Not AvailableNegative1247993 - 124834612763.2
atp-dependent rna helicase supv3l1/suv3CLV79_103220Not AvailableNegative1248343 - 1251453113219.0
tetratricopeptide repeat proteinCLV79_103221Not AvailableNegative1251494 - 125205720135.0
scp-2 sterol transfer family proteinCLV79_103222Not AvailablePositive1252161 - 12524549860.77
lysophospholipaseCLV79_103223Not AvailablePositive1252447 - 125338534108.6
uncharacterized protein (duf2235 family)CLV79_103224Not AvailableNegative1253393 - 125449041226.5

Displaying genes 1251 – 1260 of 3673 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.