Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Paracoccaceae
Genus
Limimaricola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Paracoccaceae |
| Genus | Limimaricola |
| Species | Limimaricola soesokkakensis |
| Strain | strain DSM 29956 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
629284 bp
Thymine Count
630096 bp
Guanine Count
1284212 bp
Cytosine Count
1287394 bp
Genome Length
3830986 bp
Protein-coding Genes
3606 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enamine deaminase rida (yjgf/yer057c/uk114 family) | CLV79_102437 | Not Available | Positive | 988737 - 989135 | 14524.5 |
| serine/threonine protein phosphatase 1 | CLV79_102438 | Not Available | Negative | 989132 - 989884 | 27378.3 |
| vcbs repeat protein | CLV79_102439 | Not Available | Negative | 989922 - 991466 | 55332.9 |
| putative nbd/hsp70 family sugar kinase | CLV79_102440 | Not Available | Negative | 991463 - 992728 | 45080.2 |
| xylose-binding protein | CLV79_102441 | Not Available | Positive | 992947 - 993981 | 35984.8 |
| d-xylose transport system permease protein | CLV79_102442 | Not Available | Positive | 994080 - 995405 | 46367.9 |
| monosaccharide abc transporter atp-binding protein (cut2 family) | CLV79_102443 | Not Available | Positive | 995407 - 996213 | 29043.9 |
| hypothetical protein | CLV79_102444 | Not Available | Positive | 996416 - 997390 | 35991.5 |
| endonuclease/exonuclease/phosphatase family metal-dependent hydrolase | CLV79_102445 | Not Available | Negative | 997395 - 998111 | 26095.8 |
| cardiolipin synthetase 2 | CLV79_102446 | Not Available | Negative | 998119 - 999507 | 51422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
