Saccharothrix carnea strain CGMCC 4.7097

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix carnea strain CGMCC 4.7097 is characterized by having a single replicon, indicating it possesses a streamlined genomic structure. This strain is cataloged under the accession PYAX00000000.1, which provides a reference for its genetic information. As a member of the genus Saccharothrix, this strain likely exhibits traits common to actinobacteria, such as the production of secondary metabolites and potential applications in biotechnology, particularly in antibiotic production. The unique genetic makeup of Saccharothrix carnea may contribute to its ecological niche, potentially allowing it to thrive in specific environments where other microorganisms might not. Understanding the genomic characteristics of Saccharothrix carnea strain CGMCC 4.7097 can provide insights into its biological functions and its role in microbial communities. The presence of a single replicon may suggest efficient regulation of genetic processes, which could be advantageous in competitive environments. This efficiency may also play a role in the organism's ability to adapt to various ecological conditions, making it a subject of interest for further microbiological studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix carnea
Strainstrain CGMCC 4.7097

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix carnea strain CGMCC 4.7097 Ga0171604_142, whole

Gene Summary

Adenine Count

1270353 bp

Thymine Count

1272201 bp

Guanine Count

3188212 bp

Cytosine Count

3187403 bp

Genome Length

8918169 bp

Protein-coding Genes

7955 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction endonuclease ruvcB0I31_108113Not AvailablePositive5262796 - 526339520957.4
holliday junction dna helicase subunit ruvaB0I31_108114Not AvailablePositive5263392 - 526398520407.8
holliday junction dna helicase subunit ruvbB0I31_108115Not AvailablePositive5263982 - 526504638148.7
preprotein translocase subunit yajcB0I31_108116Not AvailablePositive5265145 - 526550713188.6
preprotein translocase subunit secdB0I31_108117Not AvailablePositive5265648 - 526749263972.4
preprotein translocase subunit secfB0I31_108118Not AvailablePositive5267494 - 526868141819.0
adenine phosphoribosyltransferaseB0I31_108119Not AvailablePositive5268678 - 526919618012.0
gtp pyrophosphokinaseB0I31_108120Not AvailablePositive5269409 - 527170984989.1
peptidyl-prolyl cis-trans isomerase b (cyclophilin b)B0I31_108121Not AvailableNegative5271955 - 527280629524.6
glyoxylase-like metal-dependent hydrolase (beta-lactamase superfamily ii)B0I31_108122Not AvailablePositive5272952 - 527365924766.4

Displaying genes 4901 – 4910 of 8028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.