Saccharothrix carnea strain CGMCC 4.7097

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix carnea strain CGMCC 4.7097 is characterized by having a single replicon, indicating it possesses a streamlined genomic structure. This strain is cataloged under the accession PYAX00000000.1, which provides a reference for its genetic information. As a member of the genus Saccharothrix, this strain likely exhibits traits common to actinobacteria, such as the production of secondary metabolites and potential applications in biotechnology, particularly in antibiotic production. The unique genetic makeup of Saccharothrix carnea may contribute to its ecological niche, potentially allowing it to thrive in specific environments where other microorganisms might not. Understanding the genomic characteristics of Saccharothrix carnea strain CGMCC 4.7097 can provide insights into its biological functions and its role in microbial communities. The presence of a single replicon may suggest efficient regulation of genetic processes, which could be advantageous in competitive environments. This efficiency may also play a role in the organism's ability to adapt to various ecological conditions, making it a subject of interest for further microbiological studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix carnea
Strainstrain CGMCC 4.7097

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix carnea strain CGMCC 4.7097 Ga0171604_142, whole

Gene Summary

Adenine Count

1270353 bp

Thymine Count

1272201 bp

Guanine Count

3188212 bp

Cytosine Count

3187403 bp

Genome Length

8918169 bp

Protein-coding Genes

7955 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized protein involved in type vi secretion and phage assemblyB0I31_104195Not AvailablePositive2919362 - 292114063239.5
putative zn-binding protein involved in type vi secretionB0I31_104196Not AvailablePositive2921157 - 29214629702.0
hypothetical proteinB0I31_104197Not AvailablePositive2921462 - 292186914807.6
putative phage baseplate assembly proteinB0I31_104198Not AvailablePositive2921869 - 292380369524.2
phage tail-like proteinB0I31_104199Not AvailablePositive2923800 - 292434819548.4
hypothetical proteinB0I31_104200Not AvailablePositive2924350 - 292523731104.2
cdp-paratose 2-epimeraseB0I31_104201Not AvailablePositive2925317 - 292639939340.7
dna-binding narl/fixj family response regulatorB0I31_104202Not AvailablePositive2926550 - 292717022366.4
hypothetical proteinB0I31_104203Not AvailablePositive2927172 - 29273516536.81
hypothetical proteinB0I31_104204Not AvailablePositive2927403 - 292820027553.4

Displaying genes 2651 – 2660 of 8028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.