Saccharothrix carnea strain CGMCC 4.7097

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Saccharothrix

Description

Saccharothrix carnea strain CGMCC 4.7097 is characterized by having a single replicon, indicating it possesses a streamlined genomic structure. This strain is cataloged under the accession PYAX00000000.1, which provides a reference for its genetic information. As a member of the genus Saccharothrix, this strain likely exhibits traits common to actinobacteria, such as the production of secondary metabolites and potential applications in biotechnology, particularly in antibiotic production. The unique genetic makeup of Saccharothrix carnea may contribute to its ecological niche, potentially allowing it to thrive in specific environments where other microorganisms might not. Understanding the genomic characteristics of Saccharothrix carnea strain CGMCC 4.7097 can provide insights into its biological functions and its role in microbial communities. The presence of a single replicon may suggest efficient regulation of genetic processes, which could be advantageous in competitive environments. This efficiency may also play a role in the organism's ability to adapt to various ecological conditions, making it a subject of interest for further microbiological studies.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusSaccharothrix
SpeciesSaccharothrix carnea
Strainstrain CGMCC 4.7097

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Saccharothrix carnea strain CGMCC 4.7097 Ga0171604_142, whole

Gene Summary

Adenine Count

1270353 bp

Thymine Count

1272201 bp

Guanine Count

3188212 bp

Cytosine Count

3187403 bp

Genome Length

8918169 bp

Protein-coding Genes

7955 genes

Non-Coding Genes

73 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
two-component system response regulator vanrB0I31_103738Not AvailablePositive2570181 - 257085524438.2
two-component system sensor histidine kinase vansB0I31_103739Not AvailablePositive2570848 - 257194839654.2
d-alanyl-d-alanine dipeptidaseB0I31_103740Not AvailableNegative2571917 - 257254923840.9
d-alanine--d-alanine ligaseB0I31_103741Not AvailableNegative2572546 - 257357736612.6
d-specific alpha-keto acid dehydrogenaseB0I31_103742Not AvailableNegative2573574 - 257459637159.2
hypothetical proteinB0I31_103743Not AvailableNegative2574720 - 257514815236.7
hypothetical proteinB0I31_103744Not AvailablePositive2575363 - 257573413086.3
rna polymerase ecf family sigma subunitB0I31_103745Not AvailablePositive2575731 - 257700847102.6
hypothetical proteinB0I31_103746Not AvailablePositive2577460 - 257872845949.3
phosphotransferase family enzymeB0I31_103747Not AvailablePositive2579289 - 258028435941.3

Displaying genes 2411 – 2420 of 8028 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.