Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound pqq-dependent dehydrogenase, glucose/quinate/shikimate family | C7T35_41245 | Not Available | Negative | 8466253 - 8466694 | 15931.1 |
| acid-shock protein | C7T35_41250 | Not Available | Negative | 8466695 - 8466768 | 2406.07 |
| mate family efflux transporter | C7T35_41255 | Not Available | Negative | 8466944 - 8467136 | 7089.13 |
| maltodextrin glucosidase | C7T35_41260 | Not Available | Positive | 8467137 - 8467578 | 16583.2 |
| threonine--trna ligase | C7T35_41265 | Not Available | Positive | 8467579 - 8468019 | 16836.8 |
| lysr family transcriptional regulator | C7T35_41270 | Not Available | Positive | 8468020 - 8468458 | 16202.3 |
| dna-binding response regulator | C7T35_41275 | Not Available | Negative | 8468459 - 8468896 | 16319.7 |
| aspartate-semialdehyde dehydrogenase | C7T35_41280 | Not Available | Negative | 8468933 - 8469334 | 14831.4 |
| hypothetical protein | C7T35_41285 | Not Available | Positive | 8469335 - 8469772 | 15923.9 |
| ethanolamine ammonia lyase large subunit | C7T35_41290 | Not Available | Negative | 8469773 - 8470031 | 9282.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
