Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | C7T35_38945 | Not Available | Negative | 8076066 - 8077436 | 49311.1 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | C7T35_38950 | Not Available | Negative | 8077461 - 8078651 | 42097.9 |
| phosphatidate cytidylyltransferase | C7T35_38955 | Not Available | Negative | 8078648 - 8079493 | 30345.5 |
| di-trans,poly-cis-decaprenylcistransferase | C7T35_38960 | Not Available | Negative | 8079499 - 8080236 | 26911.1 |
| ribosome recycling factor | C7T35_38965 | Not Available | Negative | 8080238 - 8080798 | 20625.8 |
| ump kinase | C7T35_38970 | Not Available | Negative | 8080811 - 8081533 | 25581.4 |
| elongation factor ts | C7T35_38975 | Not Available | Negative | 8081626 - 8082552 | 32546.1 |
| 30s ribosomal protein s2 | C7T35_38980 | Not Available | Negative | 8082665 - 8083420 | 27634.4 |
| amidase | C7T35_38985 | Not Available | Positive | 8083599 - 8084930 | 46647.1 |
| amino acid dehydrogenase | C7T35_38990 | Not Available | Positive | 8084977 - 8086233 | 45406.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
