Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | C7T35_38785 | Not Available | Positive | 8044776 - 8045213 | 16194.5 |
| fad-binding oxidoreductase | C7T35_38790 | Not Available | Negative | 8045241 - 8048285 | 109569.0 |
| gntr family transcriptional regulator | C7T35_38795 | Not Available | Negative | 8048285 - 8048980 | 25829.4 |
| serine--glyoxylate aminotransferase | C7T35_38800 | Not Available | Positive | 8049104 - 8049256 | 5536.84 |
| alpha/beta hydrolase | C7T35_38810 | Not Available | Negative | 8049859 - 8050623 | 27232.5 |
| carboxymuconolactone decarboxylase | C7T35_38815 | Not Available | Negative | 8050620 - 8051057 | 16172.4 |
| 3-carboxy-cis,cis-muconate cycloisomerase | C7T35_38820 | Not Available | Negative | 8051054 - 8052265 | 42333.1 |
| shikimate dehydrogenase | C7T35_38825 | Not Available | Negative | 8052274 - 8053113 | 29606.8 |
| oxidoreductase | C7T35_38830 | Not Available | Negative | 8053110 - 8054150 | 36717.1 |
| abc transporter substrate-binding protein | C7T35_38835 | Not Available | Negative | 8054181 - 8055185 | 36040.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
