Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-carboxy-cis,cis-muconate cycloisomerase | C7T35_35485 | Not Available | Positive | 7359945 - 7360922 | 34324.6 |
| class ii fumarate hydratase | C7T35_35490 | Not Available | Positive | 7360929 - 7362329 | 49576.9 |
| trap transporter permease dctq | C7T35_35500 | Not Available | Positive | 7363129 - 7363594 | 17381.3 |
| c4-dicarboxylate abc transporter | C7T35_35505 | Not Available | Positive | 7363591 - 7364889 | 45464.7 |
| c4-dicarboxylate abc transporter | C7T35_35510 | Not Available | Positive | 7364922 - 7365956 | 37470.5 |
| amino acid abc transporter atp-binding protein | C7T35_35515 | Not Available | Negative | 7366038 - 7366775 | 27066.2 |
| amino acid abc transporter permease | C7T35_35520 | Not Available | Negative | 7366806 - 7367477 | 24985.6 |
| glutamate abc transporter permease | C7T35_35525 | Not Available | Negative | 7367479 - 7368204 | 26803.1 |
| amino acid abc transporter substrate-binding protein | C7T35_35530 | Not Available | Negative | 7368301 - 7369203 | 32081.6 |
| lysr family transcriptional regulator | C7T35_35535 | Not Available | Negative | 7369547 - 7370530 | 35827.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
