Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | C7T35_29825 | Not Available | Positive | 6172821 - 6174227 | 49203.1 |
| crp/fnr family transcriptional regulator | C7T35_29830 | Not Available | Positive | 6174323 - 6174790 | 16871.4 |
| hypothetical protein | C7T35_29835 | Not Available | Positive | 6175270 - 6175854 | 18970.4 |
| potassium transporter | C7T35_29840 | Not Available | Negative | 6175873 - 6177858 | 71316.8 |
| kpsf/gutq family sugar-phosphate isomerase | C7T35_29845 | Not Available | Positive | 6177926 - 6178927 | 34746.2 |
| 3-deoxy-d-manno-octulosonate 8-phosphate phosphatase | C7T35_29850 | Not Available | Positive | 6178927 - 6179475 | 19472.5 |
| lps export abc transporter periplasmic protein lptc | C7T35_29855 | Not Available | Positive | 6179472 - 6180113 | 23818.6 |
| short-chain dehydrogenase | C7T35_29860 | Not Available | Positive | 6180110 - 6180883 | 26888.6 |
| rna-binding protein | C7T35_29865 | Not Available | Negative | 6180968 - 6181501 | 16469.8 |
| hypothetical protein | C7T35_29870 | Not Available | Positive | 6181944 - 6182510 | 20100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
