Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-2-oxovalerate aldolase | C7T35_25745 | Not Available | Negative | 5340587 - 5341654 | 38675.3 |
| 4-oxalocrotonate decarboxylase | C7T35_25755 | Not Available | Negative | 5342611 - 5343405 | 28388.8 |
| 2-keto-4-pentenoate hydratase | C7T35_25760 | Not Available | Negative | 5343402 - 5344196 | 27938.9 |
| 2-hydroxymuconic semialdehyde dehydrogenase | C7T35_25765 | Not Available | Negative | 5344193 - 5345662 | 51992.6 |
| class ii aldolase family protein | C7T35_25770 | Not Available | Negative | 5345659 - 5346327 | 23722.5 |
| oxidoreductase | C7T35_25775 | Not Available | Negative | 5346372 - 5347241 | 32668.4 |
| lysr family transcriptional regulator | C7T35_25780 | Not Available | Positive | 5347324 - 5348292 | 35821.7 |
| serine hydrolase | C7T35_25785 | Not Available | Positive | 5348447 - 5350021 | 54896.5 |
| type ii toxin-antitoxin system mrna interferase toxin, rele/stbe family | C7T35_25790 | Not Available | Negative | 5350286 - 5350570 | 10759.8 |
| antitoxin of toxin-antitoxin stability system | C7T35_25795 | Not Available | Negative | 5350567 - 5350845 | 10880.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
