Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna (cytosine(1962)-c(5))-methyltransferase rlmi | C7T35_24410 | Not Available | Negative | 5067521 - 5068723 | 43630.1 |
| recombinase xerc | C7T35_24415 | Not Available | Negative | 5068720 - 5069715 | 36436.7 |
| ydcf family protein | C7T35_24420 | Not Available | Negative | 5069699 - 5070304 | 22153.9 |
| duf484 domain-containing protein | C7T35_24425 | Not Available | Negative | 5070313 - 5071002 | 25528.6 |
| diaminopimelate epimerase | C7T35_24430 | Not Available | Negative | 5071010 - 5071885 | 31373.3 |
| 2-hydroxychromene-2-carboxylate isomerase | C7T35_24435 | Not Available | Negative | 5071917 - 5072540 | 23277.6 |
| fad-dependent oxidoreductase | C7T35_24440 | Not Available | Positive | 5072562 - 5074109 | 56131.2 |
| lysr family transcriptional regulator | C7T35_24445 | Not Available | Positive | 5074109 - 5074999 | 31962.6 |
| laci family transcriptional regulator | C7T35_24450 | Not Available | Negative | 5074987 - 5075976 | 34489.9 |
| hypothetical protein | C7T35_24455 | Not Available | Negative | 5076024 - 5076836 | 29767.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
