Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| smc-scp complex subunit scpb | C7T35_22560 | Not Available | Positive | 4680791 - 4681690 | 32736.0 |
| 23s rrna pseudouridylate synthase b | C7T35_22565 | Not Available | Positive | 4681687 - 4683462 | 63336.9 |
| nucleoside-diphosphate kinase | C7T35_22570 | Not Available | Positive | 4683613 - 4684032 | 15020.2 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | C7T35_22575 | Not Available | Positive | 4684054 - 4685202 | 42164.8 |
| type iv pilus biogenesis/stability protein pilw | C7T35_22580 | Not Available | Positive | 4685207 - 4686037 | 30208.7 |
| duf4115 domain-containing protein | C7T35_22585 | Not Available | Positive | 4686030 - 4686953 | 31170.7 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | C7T35_22590 | Not Available | Positive | 4686968 - 4688245 | 45712.9 |
| histidine--trna ligase | C7T35_22595 | Not Available | Positive | 4688258 - 4689568 | 47737.1 |
| hypothetical protein | C7T35_22600 | Not Available | Positive | 4689575 - 4690264 | 25179.6 |
| outer membrane protein assembly factor bamb | C7T35_22605 | Not Available | Positive | 4690261 - 4691406 | 39782.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
