Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine synthase | C7T35_20875 | Not Available | Negative | 4316408 - 4317157 | 28368.2 |
| dna-deoxyinosine glycosylase | C7T35_20880 | Not Available | Negative | 4317154 - 4317687 | 19585.2 |
| mechanosensitive ion channel protein mscs | C7T35_20885 | Not Available | Positive | 4317735 - 4318571 | 29867.4 |
| hypothetical protein | C7T35_20890 | Not Available | Negative | 4318643 - 4319068 | 14193.7 |
| dnaase | C7T35_20895 | Not Available | Negative | 4319193 - 4320053 | 30852.0 |
| peptidase s1 | C7T35_20900 | Not Available | Positive | 4320144 - 4321145 | 34522.1 |
| atpase | C7T35_20905 | Not Available | Positive | 4321197 - 4322216 | 37378.4 |
| duf58 domain-containing protein | C7T35_20910 | Not Available | Positive | 4322197 - 4323189 | 37408.9 |
| abc transporter atp-binding protein | C7T35_20915 | Not Available | Positive | 4323186 - 4324238 | 37858.3 |
| nodulation protein nfed | C7T35_20920 | Not Available | Negative | 4324245 - 4325207 | 35912.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
