Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxyphenylacetate 2,3-dioxygenase | C7T35_19445 | Not Available | Positive | 4007676 - 4008680 | 37714.7 |
| carboxymuconolactone decarboxylase family protein | C7T35_19450 | Not Available | Positive | 4008701 - 4009231 | 19694.5 |
| abc transporter substrate-binding protein | C7T35_19455 | Not Available | Positive | 4009356 - 4010519 | 41394.6 |
| alcohol dehydrogenase | C7T35_19460 | Not Available | Positive | 4010612 - 4011739 | 40287.7 |
| aminoglycoside phosphotransferase | C7T35_19465 | Not Available | Positive | 4011736 - 4012740 | 35852.2 |
| c-terminal binding protein | C7T35_19470 | Not Available | Negative | 4012783 - 4013748 | 34444.4 |
| laci family transcriptional regulator | C7T35_19475 | Not Available | Negative | 4013770 - 4014822 | 37534.2 |
| porin | C7T35_19480 | Not Available | Positive | 4015078 - 4016304 | 42364.4 |
| lysr family transcriptional regulator | C7T35_19485 | Not Available | Negative | 4016301 - 4017233 | 33029.1 |
| tripartite tricarboxylate transporter substrate binding protein | C7T35_19490 | Not Available | Positive | 4017353 - 4018327 | 33919.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
