Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinyl-diaminopimelate desuccinylase | C7T35_14440 | Not Available | Negative | 2955385 - 2956566 | 42164.2 |
| type iv pili twitching motility protein pilt | C7T35_14445 | Not Available | Negative | 2956576 - 2957724 | 42055.8 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | C7T35_14450 | Not Available | Negative | 2957773 - 2958597 | 29373.1 |
| succinyldiaminopimelate transaminase | C7T35_14455 | Not Available | Negative | 2958594 - 2959805 | 43750.2 |
| amino-acid n-acetyltransferase | C7T35_14460 | Not Available | Negative | 2959817 - 2961163 | 49370.4 |
| hypothetical protein | C7T35_14465 | Not Available | Negative | 2961190 - 2962041 | 32189.3 |
| atp-dependent rna helicase hrpa | C7T35_14470 | Not Available | Positive | 2961925 - 2965896 | 147132.0 |
| duf3309 domain-containing protein | C7T35_14475 | Not Available | Negative | 2965964 - 2966122 | 5493.27 |
| methionine aminotransferase | C7T35_14480 | Not Available | Negative | 2966256 - 2967422 | 42359.9 |
| transcriptional regulator | C7T35_14485 | Not Available | Negative | 2967419 - 2968360 | 35094.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
