Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spermidine/putrescine abc transporter atp-binding protein | C7T35_12725 | Not Available | Negative | 2632797 - 2633870 | 38616.6 |
| hypothetical protein | C7T35_12730 | Not Available | Negative | 2633972 - 2635531 | 57660.1 |
| hypothetical protein | C7T35_12735 | Not Available | Negative | 2635535 - 2636605 | 40012.7 |
| abc transporter permease | C7T35_12740 | Not Available | Negative | 2636602 - 2637468 | 31122.9 |
| abc transporter permease | C7T35_12745 | Not Available | Negative | 2637465 - 2638307 | 30186.1 |
| spermidine/putrescine abc transporter substrate-binding protein | C7T35_12750 | Not Available | Negative | 2638340 - 2639398 | 39003.9 |
| 4-hydroxy-tetrahydrodipicolinate synthase | C7T35_12755 | Not Available | Negative | 2639441 - 2640376 | 33439.9 |
| amino acid dehydrogenase | C7T35_12760 | Not Available | Positive | 2640641 - 2641828 | 42266.6 |
| electron transporter rnfb | C7T35_12765 | Not Available | Positive | 2641861 - 2642224 | 13032.1 |
| copg family transcriptional regulator | C7T35_12770 | Not Available | Positive | 2642459 - 2642746 | 10716.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
