Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding protein | C7T35_12675 | Not Available | Positive | 2621381 - 2622139 | 27015.8 |
| bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylase | C7T35_12680 | Not Available | Positive | 2622136 - 2623761 | 59695.8 |
| tctc | C7T35_12685 | Not Available | Positive | 2623733 - 2624731 | 36085.1 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | C7T35_12690 | Not Available | Positive | 2624741 - 2625652 | 32888.2 |
| n-formylglutamate deformylase | C7T35_12695 | Not Available | Positive | 2625705 - 2626538 | 30065.9 |
| lysr family transcriptional regulator | C7T35_12700 | Not Available | Positive | 2626550 - 2627551 | 37278.8 |
| 1-pyrroline-5-carboxylate dehydrogenase | C7T35_12705 | Not Available | Positive | 2627654 - 2629270 | 59024.0 |
| eama/rhat family transporter | C7T35_12710 | Not Available | Positive | 2629365 - 2630186 | 29092.5 |
| alpha-hydroxy-acid oxidizing protein | C7T35_12715 | Not Available | Negative | 2630188 - 2631360 | 42264.4 |
| fad-binding oxidoreductase | C7T35_12720 | Not Available | Negative | 2631357 - 2632787 | 51581.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
