Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| allophanate hydrolase | C7T35_12125 | Not Available | Negative | 2511062 - 2512036 | 34711.8 |
| allophanate hydrolase | C7T35_12130 | Not Available | Negative | 2512033 - 2512695 | 23399.2 |
| abc transporter substrate-binding protein | C7T35_12135 | Not Available | Negative | 2512717 - 2513700 | 34390.1 |
| abc transporter substrate-binding protein | C7T35_12140 | Not Available | Negative | 2513754 - 2514731 | 34164.8 |
| amidase | C7T35_12145 | Not Available | Negative | 2514778 - 2516178 | 49392.2 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | C7T35_12150 | Not Available | Negative | 2516175 - 2516846 | 23250.3 |
| lysr family transcriptional regulator | C7T35_12155 | Not Available | Positive | 2516948 - 2517937 | 35474.1 |
| 4-hydroxy-4-methyl-2-oxoglutarate aldolase | C7T35_12160 | Not Available | Negative | 2517882 - 2518529 | 22495.3 |
| aspartate aminotransferase | C7T35_12165 | Not Available | Negative | 2518570 - 2519811 | 44599.4 |
| diguanylate cyclase | C7T35_12170 | Not Available | Negative | 2519811 - 2520473 | 23307.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
