Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. WS11 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | phyllosphere |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1407404 bp
Thymine Count
1398856 bp
Guanine Count
2882315 bp
Cytosine Count
2873493 bp
Genome Length
8562068 bp
Protein-coding Genes
8142 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| succinate dehydrogenase flavoprotein subunit | C7T35_06645 | Not Available | Negative | 1390259 - 1392067 | 65763.3 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | C7T35_06650 | Not Available | Negative | 1392073 - 1392438 | 13830.4 |
| succinate dehydrogenase, cytochrome b556 subunit | C7T35_06655 | Not Available | Negative | 1392452 - 1392898 | 16518.4 |
| gntr family transcriptional regulator | C7T35_06660 | Not Available | Negative | 1393077 - 1393838 | 28232.9 |
| malate dehydrogenase | C7T35_06665 | Not Available | Positive | 1394028 - 1395014 | 35100.4 |
| trans-aconitate 2-methyltransferase | C7T35_06670 | Not Available | Positive | 1395036 - 1395812 | 28754.4 |
| coa ester lyase | C7T35_06675 | Not Available | Positive | 1395869 - 1396867 | 35095.9 |
| hypothetical protein | C7T35_06680 | Not Available | Positive | 1396905 - 1397465 | 20135.7 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | C7T35_06685 | Not Available | Positive | 1397531 - 1400116 | 92567.5 |
| transcriptional regulator | C7T35_06690 | Not Available | Negative | 1400152 - 1400991 | 30357.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
