Mesorhizobium ephedrae strain 6GN-30 ZB100116

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Kumtagia

Description

Mesorhizobium ephedrae strain 6GN-30 ZB100116 is characterized by possessing a single replicon, which may indicate a streamlined genomic structure conducive to its ecological niche. The strain is cataloged under the accession number PXYK00000000.1, linking it to a specific genomic sequence that can be utilized for further studies and comparative analysis within the Mesorhizobium genus. Mesorhizobium species are known for their symbiotic relationships with leguminous plants, where they fix atmospheric nitrogen, thus contributing to soil fertility. This particular strain could play a role in enhancing the growth of ephedra plants, with potential implications for agricultural practices, particularly in areas where nitrogen is a limiting factor for plant productivity. The presence of a single replicon may also suggest a potential for efficient replication and regulation of genetic material, which could enhance the strain's adaptability to environmental stresses. Understanding the traits of Mesorhizobium ephedrae strain 6GN-30 ZB100116 can aid in elucidating its role in soil ecosystems and its potential applications in sustainable agriculture. Further research could provide insights into its symbiotic capabilities and how it interacts with host plants, thus contributing to the broader understanding of microbial ecology in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusKumtagia
SpeciesKumtagia ephedrae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium ephedrae strain 6GN-30 ZB100116, whole genome

Gene Summary

Adenine Count

1028951 bp

Thymine Count

1022778 bp

Guanine Count

2025110 bp

Cytosine Count

2035434 bp

Genome Length

6112273 bp

Protein-coding Genes

5658 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
fadr family transcriptional regulatorC7I84_03840Not AvailableNegative786901 - 78766827922.2
c4-dicarboxylate abc transporter permeaseC7I84_03845Not AvailableNegative787672 - 78895244882.0
trap transporter small permeaseC7I84_03850Not AvailableNegative788957 - 78953220633.4
c4-dicarboxylate abc transporterC7I84_03855Not AvailableNegative789759 - 79073635267.9
glucuronate isomeraseC7I84_03860Not AvailableNegative790775 - 79218452821.5
mannitol dehydrogenaseC7I84_03865Not AvailablePositive792335 - 79380151719.8
mannonate dehydrataseC7I84_03870Not AvailablePositive793803 - 79499644535.3
gfo/idh/moca family oxidoreductaseC7I84_03875Not AvailablePositive795023 - 79600934774.5
laci family transcriptional regulatorC7I84_03880Not AvailableNegative796200 - 79723737613.1
sugar abc transporter substrate-binding proteinC7I84_03885Not AvailablePositive797480 - 79846334569.3

Displaying genes 791 – 800 of 5741 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.