Mesorhizobium ephedrae strain 6GN-30 ZB100116

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Kumtagia

Description

Mesorhizobium ephedrae strain 6GN-30 ZB100116 is characterized by possessing a single replicon, which may indicate a streamlined genomic structure conducive to its ecological niche. The strain is cataloged under the accession number PXYK00000000.1, linking it to a specific genomic sequence that can be utilized for further studies and comparative analysis within the Mesorhizobium genus. Mesorhizobium species are known for their symbiotic relationships with leguminous plants, where they fix atmospheric nitrogen, thus contributing to soil fertility. This particular strain could play a role in enhancing the growth of ephedra plants, with potential implications for agricultural practices, particularly in areas where nitrogen is a limiting factor for plant productivity. The presence of a single replicon may also suggest a potential for efficient replication and regulation of genetic material, which could enhance the strain's adaptability to environmental stresses. Understanding the traits of Mesorhizobium ephedrae strain 6GN-30 ZB100116 can aid in elucidating its role in soil ecosystems and its potential applications in sustainable agriculture. Further research could provide insights into its symbiotic capabilities and how it interacts with host plants, thus contributing to the broader understanding of microbial ecology in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusKumtagia
SpeciesKumtagia ephedrae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium ephedrae strain 6GN-30 ZB100116, whole genome

Gene Summary

Adenine Count

1028951 bp

Thymine Count

1022778 bp

Guanine Count

2025110 bp

Cytosine Count

2035434 bp

Genome Length

6112273 bp

Protein-coding Genes

5658 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
repressor lexaC7I84_12470Not AvailablePositive2593955 - 259467426052.6
competence proteinC7I84_12475Not AvailableNegative2594693 - 259735692508.3
glutamate--trna ligaseC7I84_12480Not AvailablePositive2597501 - 259892551803.8
citrate (si)-synthaseC7I84_12485Not AvailablePositive2599103 - 260039248059.8
lipid-a-disaccharide synthaseC7I84_12490Not AvailableNegative2600447 - 260161342495.8
duf1009 domain-containing proteinC7I84_12495Not AvailableNegative2601610 - 260250931299.2
acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferaseC7I84_12500Not AvailableNegative2602484 - 260331428919.8
3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabzC7I84_12505Not AvailableNegative2603326 - 260378416450.2
udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferaseC7I84_12510Not AvailableNegative2603777 - 260483235668.9
outer membrane protein assembly factor bamaC7I84_12515Not AvailableNegative2604878 - 260724486400.6

Displaying genes 2461 – 2470 of 5741 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.