Mesorhizobium ephedrae strain 6GN-30 ZB100116

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Phyllobacteriaceae

Genus

Kumtagia

Description

Mesorhizobium ephedrae strain 6GN-30 ZB100116 is characterized by possessing a single replicon, which may indicate a streamlined genomic structure conducive to its ecological niche. The strain is cataloged under the accession number PXYK00000000.1, linking it to a specific genomic sequence that can be utilized for further studies and comparative analysis within the Mesorhizobium genus. Mesorhizobium species are known for their symbiotic relationships with leguminous plants, where they fix atmospheric nitrogen, thus contributing to soil fertility. This particular strain could play a role in enhancing the growth of ephedra plants, with potential implications for agricultural practices, particularly in areas where nitrogen is a limiting factor for plant productivity. The presence of a single replicon may also suggest a potential for efficient replication and regulation of genetic material, which could enhance the strain's adaptability to environmental stresses. Understanding the traits of Mesorhizobium ephedrae strain 6GN-30 ZB100116 can aid in elucidating its role in soil ecosystems and its potential applications in sustainable agriculture. Further research could provide insights into its symbiotic capabilities and how it interacts with host plants, thus contributing to the broader understanding of microbial ecology in agricultural systems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyPhyllobacteriaceae
GenusKumtagia
SpeciesKumtagia ephedrae
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Mesorhizobium ephedrae strain 6GN-30 ZB100116, whole genome

Gene Summary

Adenine Count

1028951 bp

Thymine Count

1022778 bp

Guanine Count

2025110 bp

Cytosine Count

2035434 bp

Genome Length

6112273 bp

Protein-coding Genes

5658 genes

Non-Coding Genes

83 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferaseC7I84_09970Not AvailableNegative2077240 - 207807029982.7
4-hydroxythreonine-4-phosphate dehydrogenase pdxaC7I84_09975Not AvailableNegative2078067 - 207908335276.8
molecular chaperone suraC7I84_09980Not AvailableNegative2079421 - 208035934503.3
lps-assembly protein lptdC7I84_09985Not AvailableNegative2080447 - 208296091498.1
lps export abc transporter permease lptgC7I84_09990Not AvailableNegative2082894 - 208398239927.2
lps export abc transporter permease lptfC7I84_09995Not AvailableNegative2083979 - 208517844055.3
leucyl aminopeptidaseC7I84_10000Not AvailablePositive2086281 - 208777452669.7
dna polymerase iii subunit chiC7I84_10005Not AvailablePositive2087788 - 208823716955.6
hypothetical proteinC7I84_10010Not AvailablePositive2088287 - 208888621007.3
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjC7I84_10015Not AvailablePositive2088883 - 208974031031.5

Displaying genes 1971 – 1980 of 5741 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.