Zobellella endophytica strain 59N8 ZB100060

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Aeromonadales

Family

Aeromonadaceae

Genus

Zobellella

Description

Zobellella endophytica strain 59N8 ZB100060 is characterized by possessing a single replicon, indicative of its genomic structure. The strain is cataloged under the accession number PXYG00000000.1, which provides a reference for its genetic material in scientific databases. While specific details regarding its phenotypic characteristics, habitat preferences, or metabolic capabilities are not provided, the designation as an endophytic organism suggests that Zobellella endophytica may inhabit the internal tissues of plants. Endophytes are known to play significant roles in plant health, including enhancing growth, providing resistance to pathogens, and facilitating nutrient uptake. Given its classification, Zobellella endophytica could contribute to the ecological dynamics of its plant host, potentially influencing soil health and ecosystem functioning. Understanding the interactions between endophytic bacteria like Zobellella endophytica and their plant hosts is crucial for exploring their applications in agriculture and biotechnology, particularly in the context of sustainable practices. Further research could elucidate the specific benefits this strain offers to its host and its potential utility in enhancing agricultural productivity or resilience.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAeromonadales
FamilyAeromonadaceae
GenusZobellella
SpeciesZobellella endophytica
Strainstrain 59N8 ZB100060

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Zobellella endophytica strain 59N8 ZB100060, whole genome shotgun

Gene Summary

Adenine Count

773955 bp

Thymine Count

778196 bp

Guanine Count

1307282 bp

Cytosine Count

1308626 bp

Genome Length

4168059 bp

Protein-coding Genes

3712 genes

Non-Coding Genes

96 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
type iii effectorC7H85_12465Not AvailablePositive2697940 - 269828712777.8
duf808 domain-containing proteinC7H85_12470Not AvailablePositive2698303 - 269920831253.1
eama family transporterC7H85_12475Not AvailableNegative2699205 - 270008632497.9
pyruvate formate lyase-activating proteinC7H85_12480Not AvailableNegative2700213 - 270095627221.7
formate c-acetyltransferaseC7H85_12485Not AvailableNegative2701208 - 270349084470.2
6,7-dimethyl-8-ribityllumazine synthaseC7H85_12490Not AvailablePositive2704009 - 270447616428.2
transcription antitermination factor nusbC7H85_12495Not AvailablePositive2704490 - 270490015640.8
thiamine-phosphate kinaseC7H85_12500Not AvailablePositive2704948 - 270591634248.1
phosphatidylglycerophosphatase aC7H85_12505Not AvailablePositive2705913 - 270639217149.6
nickel/dipeptide/oligopeptide abc transporter substrate-binding proteinC7H85_12515Not AvailablePositive2708630 - 271018658285.6

Displaying genes 2451 – 2460 of 3808 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.