Burkholderia sp. Nafp2/4-1b

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia sp. Nafp2/4-1b is characterized by having a single replicon, which is a significant trait as it can influence its genetic stability and replication processes. The genomic information for this strain is available under the accession number PXXL00000000.1. Burkholderia species are known for their diverse metabolic capabilities and potential roles in various ecological niches. Although specific ecological insights about Burkholderia sp. Nafp2/4-1b are not provided, members of the Burkholderia genus are typically associated with environments such as soil, water, and plant rhizospheres. They can engage in complex interactions with other microorganisms and plants, contributing to nutrient cycling and possibly aiding in plant growth. Given that Burkholderia species often exhibit a wide range of pathogenicity and symbiotic relationships, the study of Burkholderia sp. Nafp2/4-1b could reveal important aspects of microbial ecology, particularly in understanding its role within its specific habitat. The presence of a single replicon suggests a streamlined genetic framework, which could be advantageous for adaptation to environmental pressures. This trait may reflect the organism's evolutionary strategies to thrive in competitive environments. In summary, Burkholderia sp. Nafp2/4-1b, with its single replicon and under the accession PXXL00000000.1, presents an interesting subject for further research, particularly regarding its ecological roles and interactions in its native habitat.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia sp. Nafp2/4-1b
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia sp. Nafp2/4-1b contig_92_1, whole genome shotgun

Gene Summary

Adenine Count

1313345 bp

Thymine Count

1316241 bp

Guanine Count

2574540 bp

Cytosine Count

2582444 bp

Genome Length

7786570 bp

Protein-coding Genes

6699 genes

Non-Coding Genes

194 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lipopolysaccharide assembly protein lapbC7H84_20885Not AvailableNegative4536197 - 453736943728.3
duf1049 domain-containing proteinC7H84_20890Not AvailableNegative4537423 - 453771610777.8
integration host factor subunit betaC7H84_20895Not AvailableNegative4537926 - 453824911953.4
30s ribosomal protein s1C7H84_20900Not AvailableNegative4538272 - 453998462269.1
(d)cmp kinaseC7H84_20905Not AvailableNegative4540129 - 454081524352.2
3-phosphoshikimate 1-carboxyvinyltransferaseC7H84_20910Not AvailableNegative4540829 - 454213346475.1
prephenate dehydrogenase/arogenate dehydrogenase family proteinC7H84_20915Not AvailableNegative4542154 - 454308032225.5
chorismate mutaseC7H84_20920Not AvailableNegative4543267 - 454434938991.6
3-phosphoserine/phosphohydroxythreonine transaminaseC7H84_20925Not AvailableNegative4544383 - 454546539377.1
duf2059 domain-containing proteinC7H84_20930Not AvailableNegative4545638 - 454623721261.6

Displaying genes 4121 – 4130 of 6893 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.