Paracoccus methylarcula strain VKM B-2159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus methylarcula strain VKM B-2159 is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This feature is significant for its ecological interactions and potential adaptability within various environments. The strain is classified as having a single replicon, indicating a streamlined genetic organization that may influence its metabolic capabilities and reproductive strategies. The genomic information for Paracoccus methylarcula strain VKM B-2159 is cataloged under the accession number PXNQ00000000.2. This accession provides a basis for further research and exploration into the strain's genetic makeup, which could yield insights into its physiological and biochemical properties. Understanding the attributes of Paracoccus methylarcula strain VKM B-2159 can provide valuable information regarding its ecological role. The presence of flagella suggests that this strain may actively engage in nutrient acquisition and possibly play a role in biogeochemical cycles. Its single replicon structure might also indicate efficient regulation of its genetic processes, allowing it to thrive in various niches. Overall, the traits of this bacterium highlight its potential significance in microbial ecosystems and its adaptability to environmental challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus methylarcula
Strainstrain VKM B-2159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus methylarcula strain VKM B-2159 contig00028, whole

Gene Summary

Adenine Count

775587 bp

Thymine Count

790199 bp

Guanine Count

1356124 bp

Cytosine Count

1310648 bp

Genome Length

4232558 bp

Protein-coding Genes

3628 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna (adenine(2030)-n(6))-methyltransferase rlmjA7A09_002715Not AvailableNegative595738 - 59651728482.2
duf1127 domain-containing proteinA7A09_002720Not AvailableNegative597036 - 5971795489.58
mrp family atp-binding proteinA7A09_002725Not AvailablePositive597595 - 59867737230.6
cell division/cell wall cluster transcriptional repressor mrazA7A09_002730Not AvailablePositive599373 - 59991520348.7
16s rrna (cytosine(1402)-n(4))-methyltransferase rsmhA7A09_002735Not AvailablePositive599919 - 60089034567.5
penicillin-binding protein 2A7A09_002745Not AvailablePositive601252 - 60308165704.4
udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligaseA7A09_002750Not AvailablePositive603078 - 60457752553.3
udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligaseA7A09_002755Not AvailablePositive604574 - 60595647648.4
phospho-n-acetylmuramoyl-pentapeptide- transferaseA7A09_002760Not AvailablePositive605960 - 60704238425.0
udp-n-acetylmuramoyl-l-alanine--d-glutamate ligaseA7A09_002765Not AvailablePositive607124 - 60852749551.6

Displaying genes 551 – 560 of 3710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.