Paracoccus methylarcula strain VKM B-2159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus methylarcula strain VKM B-2159 is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This feature is significant for its ecological interactions and potential adaptability within various environments. The strain is classified as having a single replicon, indicating a streamlined genetic organization that may influence its metabolic capabilities and reproductive strategies. The genomic information for Paracoccus methylarcula strain VKM B-2159 is cataloged under the accession number PXNQ00000000.2. This accession provides a basis for further research and exploration into the strain's genetic makeup, which could yield insights into its physiological and biochemical properties. Understanding the attributes of Paracoccus methylarcula strain VKM B-2159 can provide valuable information regarding its ecological role. The presence of flagella suggests that this strain may actively engage in nutrient acquisition and possibly play a role in biogeochemical cycles. Its single replicon structure might also indicate efficient regulation of its genetic processes, allowing it to thrive in various niches. Overall, the traits of this bacterium highlight its potential significance in microbial ecosystems and its adaptability to environmental challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus methylarcula
Strainstrain VKM B-2159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus methylarcula strain VKM B-2159 contig00028, whole

Gene Summary

Adenine Count

775587 bp

Thymine Count

790199 bp

Guanine Count

1356124 bp

Cytosine Count

1310648 bp

Genome Length

4232558 bp

Protein-coding Genes

3628 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3'-5' exonucleaseA7A09_018520Not AvailablePositive3841400 - 384337369961.1
hypothetical proteinA7A09_018525Not AvailableNegative3843319 - 384381918151.7
molecular chaperone djiaA7A09_018530Not AvailableNegative3843864 - 384459226578.2
Trna-serNot AvailableNot AvailablePositive3845783 - 3845872Not Available
hlyc/corc family transporterA7A09_018540Not AvailableNegative3845834 - 384738756381.1
site-specific tyrosine recombinase xerdA7A09_018545Not AvailableNegative3847396 - 384837035398.3
hypothetical proteinA7A09_018550Not AvailableNegative3848367 - 384981851318.1
shikimate kinaseA7A09_018555Not AvailablePositive3850126 - 385066219728.8
3-dehydroquinate synthaseA7A09_018560Not AvailablePositive3850659 - 385177139549.0
glu/leu/phe/val dehydrogenaseA7A09_018565Not AvailableNegative3851832 - 385287836548.7

Displaying genes 3391 – 3400 of 3710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.