Paracoccus methylarcula strain VKM B-2159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus methylarcula strain VKM B-2159 is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This feature is significant for its ecological interactions and potential adaptability within various environments. The strain is classified as having a single replicon, indicating a streamlined genetic organization that may influence its metabolic capabilities and reproductive strategies. The genomic information for Paracoccus methylarcula strain VKM B-2159 is cataloged under the accession number PXNQ00000000.2. This accession provides a basis for further research and exploration into the strain's genetic makeup, which could yield insights into its physiological and biochemical properties. Understanding the attributes of Paracoccus methylarcula strain VKM B-2159 can provide valuable information regarding its ecological role. The presence of flagella suggests that this strain may actively engage in nutrient acquisition and possibly play a role in biogeochemical cycles. Its single replicon structure might also indicate efficient regulation of its genetic processes, allowing it to thrive in various niches. Overall, the traits of this bacterium highlight its potential significance in microbial ecosystems and its adaptability to environmental challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus methylarcula
Strainstrain VKM B-2159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus methylarcula strain VKM B-2159 contig00028, whole

Gene Summary

Adenine Count

775587 bp

Thymine Count

790199 bp

Guanine Count

1356124 bp

Cytosine Count

1310648 bp

Genome Length

4232558 bp

Protein-coding Genes

3628 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidaseA7A09_016620Not AvailableNegative3453495 - 345500953336.4
nicotinate-nucleotide adenylyltransferaseA7A09_016625Not AvailableNegative3454913 - 345553623229.6
ggdef domain-containing proteinA7A09_016630Not AvailableNegative3455608 - 345667538404.4
hypothetical proteinA7A09_016635Not AvailableNegative3456672 - 345723221643.9
duf3572 domain-containing proteinA7A09_016640Not AvailableNegative3457311 - 345760110428.4
duf983 domain-containing proteinA7A09_016645Not AvailablePositive3457724 - 345822417862.7
dna mismatch repair protein muttA7A09_016650Not AvailablePositive3458221 - 345892225237.9
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-coa isomeraseA7A09_016655Not AvailableNegative3459112 - 345988227390.5
cytochrome c-type biogenesis protein ccmhA7A09_016660Not AvailableNegative3459949 - 346040716807.6
heme lyase ccmf/nrfe family subunitA7A09_016665Not AvailableNegative3460404 - 346230868487.5

Displaying genes 3061 – 3070 of 3710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.