Paracoccus methylarcula strain VKM B-2159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus methylarcula strain VKM B-2159 is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This feature is significant for its ecological interactions and potential adaptability within various environments. The strain is classified as having a single replicon, indicating a streamlined genetic organization that may influence its metabolic capabilities and reproductive strategies. The genomic information for Paracoccus methylarcula strain VKM B-2159 is cataloged under the accession number PXNQ00000000.2. This accession provides a basis for further research and exploration into the strain's genetic makeup, which could yield insights into its physiological and biochemical properties. Understanding the attributes of Paracoccus methylarcula strain VKM B-2159 can provide valuable information regarding its ecological role. The presence of flagella suggests that this strain may actively engage in nutrient acquisition and possibly play a role in biogeochemical cycles. Its single replicon structure might also indicate efficient regulation of its genetic processes, allowing it to thrive in various niches. Overall, the traits of this bacterium highlight its potential significance in microbial ecosystems and its adaptability to environmental challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus methylarcula
Strainstrain VKM B-2159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus methylarcula strain VKM B-2159 contig00028, whole

Gene Summary

Adenine Count

775587 bp

Thymine Count

790199 bp

Guanine Count

1356124 bp

Cytosine Count

1310648 bp

Genome Length

4232558 bp

Protein-coding Genes

3628 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinA7A09_015225Not AvailableNegative3173961 - 317454822167.3
recombinase recaA7A09_015230Not AvailablePositive3174789 - 317586238238.6
alanine--trna ligaseA7A09_015235Not AvailablePositive3176065 - 317872295702.6
duf1330 domain-containing proteinA7A09_015240Not AvailablePositive3178719 - 317901510591.5
duf4177 domain-containing proteinA7A09_015245Not AvailableNegative3179056 - 317946914812.2
asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit bA7A09_015250Not AvailableNegative3179633 - 318114455036.8
hypothetical proteinA7A09_015255Not AvailablePositive3181241 - 31814327259.84
lytic transglycosylase domain-containing proteinA7A09_015260Not AvailablePositive3181494 - 318212022432.6
tigr00282 family metallophosphoesteraseA7A09_015265Not AvailablePositive3182171 - 318299229397.2
datp pyrophosphohydrolaseA7A09_015270Not AvailablePositive3183127 - 318490563344.1

Displaying genes 2811 – 2820 of 3710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.