Paracoccus methylarcula strain VKM B-2159

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Paracoccaceae

Genus

Paracoccus

Description

Paracoccus methylarcula strain VKM B-2159 is a notable bacterium characterized by the presence of flagella, which contribute to its motility. This feature is significant for its ecological interactions and potential adaptability within various environments. The strain is classified as having a single replicon, indicating a streamlined genetic organization that may influence its metabolic capabilities and reproductive strategies. The genomic information for Paracoccus methylarcula strain VKM B-2159 is cataloged under the accession number PXNQ00000000.2. This accession provides a basis for further research and exploration into the strain's genetic makeup, which could yield insights into its physiological and biochemical properties. Understanding the attributes of Paracoccus methylarcula strain VKM B-2159 can provide valuable information regarding its ecological role. The presence of flagella suggests that this strain may actively engage in nutrient acquisition and possibly play a role in biogeochemical cycles. Its single replicon structure might also indicate efficient regulation of its genetic processes, allowing it to thrive in various niches. Overall, the traits of this bacterium highlight its potential significance in microbial ecosystems and its adaptability to environmental challenges.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyParacoccaceae
GenusParacoccus
SpeciesParacoccus methylarcula
Strainstrain VKM B-2159

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Paracoccus methylarcula strain VKM B-2159 contig00028, whole

Gene Summary

Adenine Count

775587 bp

Thymine Count

790199 bp

Guanine Count

1356124 bp

Cytosine Count

1310648 bp

Genome Length

4232558 bp

Protein-coding Genes

3628 genes

Non-Coding Genes

82 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
endopeptidase laA7A09_005250Not AvailableNegative1131693 - 113411388730.1
hamp domain-containing proteinA7A09_005255Not AvailableNegative1134273 - 113562549532.9
mbl fold metallo-hydrolaseA7A09_005260Not AvailablePositive1135660 - 113652330483.5
Trna-asnNot AvailableNot AvailablePositive1136583 - 1136657Not Available
alpha/beta hydrolaseA7A09_005270Not AvailableNegative1136797 - 113757327721.1
2-hydroxychromene-2-carboxylate isomeraseA7A09_005275Not AvailableNegative1137570 - 113816922308.4
ribose-phosphate pyrophosphokinaseA7A09_005280Not AvailablePositive1138256 - 113927536953.8
phosphoribosylamine--glycine ligaseA7A09_005285Not AvailableNegative1139355 - 114062344442.6
efflux rnd transporter periplasmic adaptor subunitA7A09_005295Not AvailablePositive1142402 - 114374246788.5
hydrophobe/amphiphile efflux-1 family rnd transporterA7A09_005300Not AvailablePositive1143768 - 1146902111930.0

Displaying genes 1011 – 1020 of 3710 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.